Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs34993057 chr11:24233275 T/A 4.41E-14 488 31 31.27 13.52 KM Plot
PRAD rs34994690 chr20:2055452 AAAGG/AAAGGAAGG 4.12E-7 487 28.8 33.53 29.55 KM Plot
PRAD rs35001236 chr17:62985398 A/G 9.42E-9 486 30.8 31.33 19.63 KM Plot
PRAD rs35005772 chr1:6733081 C/T 0.00012 489 30.37 31.37 31.48 KM Plot
PRAD rs35011716 chr17:62983526 C/A 1.2E-8 482 30.8 31.62 19.63 KM Plot
PRAD rs35020254 chr17:62973790 C/T 8.78E-9 489 30.8 31.37 19.63 KM Plot
PRAD rs35022121 chr8:71521260 G/C 5.85E-7 488 31.18 30.73 24.27 KM Plot
PRAD rs35031414 chr11:28545563 T/C 5.97E-5 485 29.1 31.42 32.25 KM Plot
PRAD rs35035092 chr22:18463274 G/T 2.29E-8 492 30.9 31.43 27.37 KM Plot
PRAD rs35051265 chr16:5002903 T/C 4.86E-5 474 31.27 29.63 27.77 KM Plot
PRAD rs35089989 chr22:18424298 T/C 5.25E-9 489 30.27 32.83 25.02 KM Plot
PRAD rs35093417 chr17:62987708 G/C 7.89E-9 489 30.8 31.37 19.63 KM Plot
PRAD rs35121012 chr7:6775727 G/T 3.55E-5 490 31 30.27 35.28 KM Plot
PRAD rs35126600 chr1:6721585 CTCT/C 0.000131 493 29.6 31.13 30.73 KM Plot
PRAD rs35140173 chr11:24233176 G/T 4.54E-14 487 31.07 31.27 13.52 KM Plot